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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs80070400 chr4:84437326 G/T 9.99E-16 399 14.93 18.07 5.17 KM Plot
LGG rs80075344 chr4:1043316 C/T 0.000202 399 16.25 13.13 5.52 KM Plot
LGG rs80113028 chr7:55983269 T/C 1.5E-10 407 15.2 15.93 7.8 KM Plot
LGG rs80124892 chr7:56063996 A/T 1.64E-10 405 15.3 16.23 7.8 KM Plot
LGG rs80161161 chr2:17812016 C/T 7.32E-5 398 15.45 15.37 8.07 KM Plot
LGG rs8020091 chr14:74318547 C/G 0 405 15.03 16.9 1.23 KM Plot
LGG rs80206401 chr5:156007371 C/A 8.66E-5 404 15.38 15.33 11.63 KM Plot
LGG rs80219338 chr17:48607886 G/A 6.13E-5 406 15.18 17.43 4.1 KM Plot
LGG rs80222030 chr2:17852510 T/C 1.44E-8 406 15.3 15.67 7.33 KM Plot
LGG rs80255154 chr4:867789 A/T 0 404 15.57 13.67 0.23 KM Plot
LGG rs80265588 chr16:67792746 G/A 2.92E-11 406 15.17 18.37 6.47 KM Plot
LGG rs80275589 chr5:155989723 C/T 5.05E-6 407 15.27 15.23 15.37 KM Plot
LGG rs80297352 chr7:55990661 T/C 1.53E-10 405 15.3 15.93 7.8 KM Plot
LGG rs80305379 chr6:151881028 A/G 0.000188 406 15.73 12.9 2.53 KM Plot
LGG rs8051653 chr16:67848515 T/C 2.16E-11 407 15.17 18.37 6.47 KM Plot